Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs17047103 chr3:67991143 T/C 5.56E-11 286 26 26.4 12.37 KM Plot
KIRP rs17068102 chr13:46961043 C/G 6.35E-7 289 25.02 30.2 23.23 KM Plot
KIRP rs17078259 chr6:148670925 G/A 9.7E-5 286 26.4 18.67 18.2 KM Plot
KIRP rs17088885 chr18:71830354 T/A 1.27E-10 284 26 23.1 9 KM Plot
KIRP rs17097262 chr14:60738357 C/T 3.65E-5 289 25.6 25.85 23.93 KM Plot
KIRP rs17117647 chr1:58995176 A/T 2.36E-5 288 25.65 27.43 13.17 KM Plot
KIRP rs17117678 chr1:58999651 T/G 2.29E-5 289 25.6 27.43 13.17 KM Plot
KIRP rs17140779 chr3:67992898 C/T 4.29E-7 289 12.37 28.03 26 KM Plot
KIRP rs17162401 chr7:10054372 C/G 2.77E-12 289 26.2 20.58 10.55 KM Plot
KIRP rs17163720 chr1:26549399 A/G 0.000108 289 13.17 27.43 25.93 KM Plot
KIRP rs17163808 chr1:26599489 A/G 2.45E-6 286 25.62 29.77 14.38 KM Plot
KIRP rs17178611 chr21:44229685 A/G 0.000162 286 25.53 43.53 13.07 KM Plot
KIRP rs17178758 chr21:44298404 G/A 0.000151 289 25.58 40.7 13.07 KM Plot
KIRP rs17178785 chr21:44301452 G/A 0.000151 289 25.58 40.7 13.07 KM Plot
KIRP rs17197500 chr11:47077032 A/G 9.01E-12 287 25.57 29.8 10.82 KM Plot